CDS

Accession Number TCMCG066C00030
gbkey CDS
Protein Id XP_034587458.1
Location join(170355..170701,170782..170848,170953..171043,171130..171182,171297..171361,171684..171789,172597..172707,172868..172927,173888..173917,174159..174209,174283..174381,175077..175136,175207..175296,176399..176500,176586..176696,176774..176890,176974..177090,177175..177255,178396..178500,178584..178664,178747..178893,178968..179012,179865..179942,180010..180149,180266..180365,180928..181049,181190..181325,181406..181536,182544..182669,182744..182799,183505..183575,184399..184483,184561..184664,185088..185216,185336..185386)
Gene LOC117849852
GeneID 117849852
Organism Setaria viridis

Protein

Length 1154aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034731567.1
Definition DNA-directed RNA polymerase III subunit 2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03021        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGGTTCCCCCCCCAGGCGACGATGCGGCCAAAAAGGACAAGGATGTGCCTCCACCGTCCTACCGCTCGCTGGCCGCGCCGGTCGCCAACCCCGTCGACAAGTTCGCGCTCCTCCCCGCATTCCTCAAGGTCCGAGGGCTCGTCAAGGAGCACATCGACTCCTTCAACTACTTCATCACCAGGGGAATCAGGAACATCATCCAGGCAAACAATCGGATTGAGGCCCGCAATGACCCAAACATCTACCTTAGGTACACAAACGTCCATGTTGGCACGCCCTCAGTTCAAGTTGATTACAAAGTCGAAGAAATCACGCCGCACTTTTGCCGCCTTACTGACCGCACTTATTCTGCTCCTATAAAAGTTGATATCGAATATACCGTCGGGAAGCAGCATGAGCTGCAGTTTAAGAGGAACGTTCTCATTGGCTACATGCCCATTATGCTTAGAAGTTATGCATGTATTCTGCATGGAAAGGATGAAGCTGAACTAGCAAGACTCGGTGAATGCCCTCTTGATCCTGGTGGCTACTTCATAGTCAAAGGAACTGAGAAGGTCATTCTAATACAAGAACAGCTATCGAAGAATCGTATTATTATAGACACCGATAGTAAAGGAAGGGTGATTGCATCTGTTACCAGCAGCACACATGAAATTAAAAGCAAGACGGTGATTACTTTGGATAAGGAGAAGATCTATCTACAGCTGAATCAATTCACGAAACCGATTCCAATAATAGTGGTCATGAAAGCTATGGGAATGGAAAGTGATCAAGAGGTTGTACAGATGGTTGGAAGAGATCCAAGATATGGAGACCTCCTATTCCCATCTATTCAGGAATGTGCCTCAGAGAGAATATATACGCAACAGCAAGCCCTGCAGTACATGGATGAGAAGGTCACATATCCTGGTGCAGGAAACCAGAAGGAGGGTCGATCGAAATCAATCCTACGTGATGTGTTTATTGCACATGTGCCGGTCAAGAACGGGAACTTCCGACAAAAATGTATATACACTGGCGTAATGTTAAGGCGCATGATGGACGCAATCTTGAATGCTAACACCTTTGATGATAAGGATTATGTAGGGAATAAGAGGCTGGAGCTGTCTGGTCAACTAATATCCCTGCTTTTTGAGGATTTGTTCAAAACAATGAATTCCCAAGCTGTAGAGCTCATGAACAAAAATAGCGACAAGACTCGTTCTAGTCCTTCAGATTTCAGCCAGTTGATAAAGCATGAATCCATAACCTCTGGTTTGGAGAGGGCTATTTCTACAGGAAATTGGGATATTAAACGGTTTAGGATGCATAGGAAAGGTGTGTCACAGGTTCTTTCTAGGCTATCGTACATGGCATCATTAGGCTACATGACACGGATAACACCACAGTTTGAGAAGACACGGAAAACAAGTGGGCCACGTGCTTTGCAACCTAGTCAGTGGGGTATGCTTTGCCCATGTGATACTCCTGAAGGAGAAGCTTGTGGATTGACGAAAAATTTGGCTCTATTGACTCACGTTACAACAGATCAAGAGGAAGGCCCGCTGATGAATCTGTGTAAAAGTCTTGGTGTGGAAGATTTATCGCTTCTGTCTGGAGAAGAAATACATGCACCAGGTTCTTTTTTGGTGATGTTCAATGGATTAATACTGGGGAAACACAGGCAGCCTCAGACATTTGCTAACGCTATGAGAAACTTGCGTCGATCAGGCAAAATTGGAGAGTTTGTAAGCATTTTTGTAAATGAGAAACAGCATTGCATTCACATTGCCTCTGATGGTGGTCGTGTATGTCGCCCACTTATAATTGCTGATAAGGGGATATCAAGGGTCAAAGAGCATCATATGAAAGAACTGAGGGATGGTGTTCGTTCTTTCGATGATTTTCTGCGTGATGGATTGATCGAATATCTTGACGTCAATGAAGAGAACAATGCATTGATTGCATTGTATGAGCATGTGGATCAAGATGATGTTGAAAGAAGCAGCATCACACACATTGAAATAGAGCCATTGTCTATCTTAGGAGTTGTATCCGGACTTATTCCTTATCCACACCATAACCAATCTCCACGTAATACTTATCAGTGTGCGATGGGTAAGCAAGCGATGGGAAATATTGCATATAATCAGTTGTTCAGAGCAGATTCACTACTCTACTTACTAGTGTATGCACAACGCCCACTGCTAACAACCAAAACAATTGAATTGGTGGGATACGACAAGCTTGGTGCTGGGCAGAATGCCACTGTTGCTGTCATGGGTTATAGTGGATATGATATTGAAGATGCAATTGTAATGAATAAATCATCGCTTGATCGAGGTTTCGGTCGTTGCATAGCAATGAAAAAGTACACAGTTATAAAGGAGTACTATGGAGAAGGTGTGTCTGATAGGATCGCTAAACCACAAAGAGATAAAGATGGTGCTTTGGTAAAGCAGAATATGCGGGCACTGGATGAAGATGGCATTGCTGCACCTGGTCAAATAATTCGCAATCATGATGTCTATGTGAACAAGCAATCTCCCAAAGTTATAGATAGAAGAGGTGCTGGTGCACCGTTAATGGACAGGGACTACAAGGACTCACCGGCCATTTACAAAGGTGTTGATGGTGAGACTACTGTTGTAGATCGTGTAATGCTTTGTTCAGATACAAATGAGAAGCTATCTATTAAATGCATTATCCGCCATACAAGGAGGCCAGAGGTTGGTGATAAATTTAGTAGCAGACATGGGCAGAAAGGTGTTTGTGGCACCATTGTTCAGCAGGAGGACTTCCCCTTCTCTGAGAGGGGAATATGCCCTGATTTAATTATGAATCCACATGGATTCCCTAGTCGTATGACTATAGGTAAAATGATTGAACTTATTGGTGGAAAGGCTGGTGTATCTTGTGGTCGATTCCATTATGGCAGTGCATTTGGTGAACCAAGTGGTAATGCTGATAAAGTGGAAGACATAAGCAATACTCTAATCAAGCATGGCTTCAGCTATAATGGAAAAGATTTCTTGTACTCAGGCATTCTAGGTCATCCTCTGGAGGCATACATCTTCATGGGACCAATCTACTATCAGAAACTGAAGCACATGGTTCTTGATAAGATGCATGCTCGAGCTAGTGGACCACGAGTGTTGTTAACCAGGCAGCCTACTGAAGGGCGAAGTCGCGATGGAGGTCTGCGTCTTGGTGAAATGGAACGTGACTGTTTGATTGCATATGGTGCAAGCATGCTGATCTTTGAACGTCTACTTCTATCCAGTGATCCATATCAAGTCCAGGTTTGCAGAAAATGTGGCTTGCTGGGGTACTACAACTATAAACTTAAGACTTCGTACTGTTCAATGTGCAAGAACGGGGAAAATATGGCCAAGATGAGGCTGCCATATGCCTGCAAGCTTTTATTCCAGGAATTGCAATCAATGAATGTTGTTCCACGATTGAAGCTAACCGAAGGATAG
Protein:  
MTVPPPGDDAAKKDKDVPPPSYRSLAAPVANPVDKFALLPAFLKVRGLVKEHIDSFNYFITRGIRNIIQANNRIEARNDPNIYLRYTNVHVGTPSVQVDYKVEEITPHFCRLTDRTYSAPIKVDIEYTVGKQHELQFKRNVLIGYMPIMLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDSKGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMVGRDPRYGDLLFPSIQECASERIYTQQQALQYMDEKVTYPGAGNQKEGRSKSILRDVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDKDYVGNKRLELSGQLISLLFEDLFKTMNSQAVELMNKNSDKTRSSPSDFSQLIKHESITSGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHRQPQTFANAMRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVKEHHMKELRDGVRSFDDFLRDGLIEYLDVNEENNALIALYEHVDQDDVERSSITHIEIEPLSILGVVSGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGYDKLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVIKEYYGEGVSDRIAKPQRDKDGALVKQNMRALDEDGIAAPGQIIRNHDVYVNKQSPKVIDRRGAGAPLMDRDYKDSPAIYKGVDGETTVVDRVMLCSDTNEKLSIKCIIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELIGGKAGVSCGRFHYGSAFGEPSGNADKVEDISNTLIKHGFSYNGKDFLYSGILGHPLEAYIFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLLSSDPYQVQVCRKCGLLGYYNYKLKTSYCSMCKNGENMAKMRLPYACKLLFQELQSMNVVPRLKLTEG